Does the flexible loop of the M17 aminopeptidase from Plasmodium falciparum control entrance to the active site? (#345)
Malaria is a serious disease,
which annually affects around 300-500 million people and causes 2 million deaths.
The disease is caused by Plasmodium parasites with Plasmodium falciparum
commonly causing the most serious disease. During the clinical manifestation,
the plasmodiidae enter erythrocytes in order to reproduce. Most antimalarial
drugs influence the intra-erythrocytic stage of the parasite life-cycle. There
is a increasing problem with drug resistance and a constant need of new
antimalarial drug targets. In this context, the M17 amino peptidase from P.
falciparum 3D7 was investigated as a possible target for new antimalarial drugs
due to its crucial role in parasite development. Reducing M17 activity in
P.falciparum has shown that the enzyme activity is crucial in the
pre-erythrocytic stage of the parasite life-cycle. The functional M17 homo
hexamer forms six active sites, which are arranged in a disc like fashion
inwards the oligomer. Every active site contains two Zink ions. The X-ray
crystal structure of M17 has been solved and a structure-based drug design
approach to designing inhibitors of M17 has been undertaken in recent years.
Analysis of the X-ray crystal structure showed that a single loop in the M17
monomer (residues 255-273) was flexible and was hypothesized to act as a
regulatory mechanism of enzyme activity. This loop may guard the entrance of
the active site cavity. Therefore the structure is going to be analyzed by
point mutations, cysteine scanning and FRET in order to determine the role of
this loop in relation to enzyme activity and substrate processing.